Databases Update

Databases widget icon

Updates local systems biology databases, like gene ontologies, annotations, gene names, protein interaction networks, and similar.



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With the bioinformatics add-on you can access several databases directly from Orange. The widget can also be used to update and manage locally stored databases.

Databases widget

  1. Find the desired database.
  2. A list of available databases described with data source, update availability, date of your last update and file size. A large Update button will be displayed next to the database that needs to be updated.
  3. Update All will update and Download All will download all the selected databases. Cancel will abort the action.
  4. Some data sets require the Access code. Type it in the provided field to access the database.
  5. Information on the selected databases.

To get a more detailed information on the particular database hover on its name.

Databases widget